A modular tool to aggregate results from bioinformatics analyses across many samples into a single report.
Report
generated on 2024-06-05, 21:28 CEST
based on data in:
/home/pascal/Documents/git_projects/grifo/src_0.6/multiqc
NanoStat
NanoStat reports various statistics from a long read sequencing dataset in FASTQ, BAM or sequencing summary format.DOI: 10.1093/bioinformatics/bty149.
Summary Statistics
| Sample Name | Median length | Read N50 | Median Qual | # Reads (K) | Total Bases (Mb) |
|---|---|---|---|---|---|
| barcode01_statreports | 631bp | 632bp | 11.1 | 25.0K | 16.1Mb |
| barcode02_statreports | 639bp | 640bp | 11.1 | 26.7K | 17.3Mb |
| barcode03_statreports | 642bp | 643bp | 11.1 | 20.9K | 13.7Mb |
Reads by quality
Read counts categorised by read quality (Phred score).
Sequencing machines assign each generated read a quality score using the Phred scale. The phred score represents the liklelyhood that a given read contains errors. High quality reads have a high score.